p5-Bio-Variation-1.7.5p0
bioperl variation-related functionality
Back to search · Project homepage
Description
Bio::Variation name space contains modules to store sequence variation
information as differences between the reference sequence and changes
sequences. Also included are classes to write out and recreate objects from
EMBL-like flat files and XML. Lastly, there are simple classes to calculate
values for sequence change objects.
Package information
- Ports path
- biology/p5-Bio-Variation
- Package architecture
- *
- Maintainer
- The OpenBSD ports mailing-list <ports@openbsd.org>
- Categories
- biology, perl5
- Available flavors
- None listed
These are ports metadata. Binary availability depends on the release, architecture and mirror. Build and test dependencies are not an installation checklist.
Direct dependencies
Runtime
- biology/p5-Bio-DB-EMBL
- biology/p5-Bio-DB-NCBIHelper
- biology/bioperl STEM->=1.7.7
- devel/p5-IO-String
- textproc/p5-XML-Twig
- textproc/p5-XML-Writer STEM->=0.4
Test
- biology/p5-Bio-DB-EMBL
- biology/p5-Bio-DB-NCBIHelper
- biology/bioperl STEM->=1.7.7
- devel/p5-IO-String
- textproc/p5-XML-Twig
- textproc/p5-XML-Writer STEM->=0.4
Used by (1 dependency relationships)
Includes library, runtime, build and test relationships. Results load 100 at a time.