perl tools for bioinformatics
Project homepage: https://bioperl.org/
Description
BioPerl is a toolkit of perl modules useful in building bioinformatics
solutions in Perl.
Package information
- Ports path
- biology/bioperl
- Package architecture
- *
- Maintainer
- The OpenBSD ports mailing-list <ports@openbsd.org>
- Categories
- biology, perl5
- Available flavors
- None listed
Ports list build and test dependencies as well as runtime dependencies. pkg_add selects those needed for installation.
Direct dependencies
Runtime
- devel/p5-Data-Stag
- devel/p5-Error
- devel/p5-Graph
- devel/p5-IO-String
- devel/p5-IO-stringy
- devel/p5-IPC-Run
- devel/p5-List-MoreUtils
- devel/p5-Module-Build
- devel/p5-Set-Scalar
- devel/p5-Test-Most
- devel/p5-Test-RequiresInternet
- devel/p5-YAML
- textproc/p5-Libxml
- textproc/p5-XML-DOM
- textproc/p5-XML-DOM-XPath
- textproc/p5-XML-LibXML
- textproc/p5-XML-SAX
- textproc/p5-XML-SAX-Base
- textproc/p5-XML-SAX-Writer
- textproc/p5-XML-Twig
- textproc/p5-XML-Writer
- www/p5-HTTP-Message
- www/p5-URI
- www/p5-libwww
Test
- devel/p5-Test-Memory-Cycle
- devel/p5-Test-Weaken
- devel/p5-Data-Stag
- devel/p5-Error
- devel/p5-Graph
- devel/p5-IO-String
- devel/p5-IO-stringy
- devel/p5-IPC-Run
- devel/p5-List-MoreUtils
- devel/p5-Module-Build
- devel/p5-Set-Scalar
- devel/p5-Test-Most
- devel/p5-Test-RequiresInternet
- devel/p5-YAML
- textproc/p5-Libxml
- textproc/p5-XML-DOM
- textproc/p5-XML-DOM-XPath
- textproc/p5-XML-LibXML
- textproc/p5-XML-SAX
- textproc/p5-XML-SAX-Base
- textproc/p5-XML-SAX-Writer
- textproc/p5-XML-Twig
- textproc/p5-XML-Writer
- www/p5-HTTP-Message
- www/p5-URI
- www/p5-libwww
- devel/p5-Test-Pod
- devel/p5-Test-Pod-Coverage
Used by (9 dependency relationships)
Includes library, runtime, build and test dependencies.